Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cul4aQ3TCH7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cul4aQ3TCH7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cul4aQ3TCH7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cul4aQ3TCH7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cul4aQ3TCH7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cul4aQ3TCH7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cul4aQ3TCH7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Gm7791-201ENSMUST00000219066 539 ntBASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cul4aQ3TCH7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cul4aQ3TCH7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Gm18958-201ENSMUST00000174258 762 ntBASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms