Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Gm9731-201ENSMUST00000209480 747 ntBASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhej1Q3KNJ2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
Nhej1Q3KNJ2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nhej1Q3KNJ2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nhej1Q3KNJ2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nhej1Q3KNJ2 Gm15378-201ENSMUST00000121894 207 ntBASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhej1Q3KNJ2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Gm5643-201ENSMUST00000117081 966 ntBASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nhej1Q3KNJ2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nhej1Q3KNJ2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Gm12527-201ENSMUST00000117967 564 ntBASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms