Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Tff1Q08423 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.93□□□□□ -0.18
Tff1Q08423 Mir5122-201ENSMUST00000175004 89 ntBASIC13.93□□□□□ -0.18
Tff1Q08423 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tff1Q08423 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.93□□□□□ -0.18
Tff1Q08423 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.92□□□□□ -0.18
Tff1Q08423 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Tff1Q08423 Gm6433-201ENSMUST00000118634 875 ntBASIC13.92□□□□□ -0.18
Tff1Q08423 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Tff1Q08423 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Tff1Q08423 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.92□□□□□ -0.18
Tff1Q08423 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.92□□□□□ -0.18
Tff1Q08423 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.92□□□□□ -0.18
Tff1Q08423 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.92□□□□□ -0.18
Tff1Q08423 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.92□□□□□ -0.18
Tff1Q08423 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tff1Q08423 Haglr-201ENSMUST00000100000 2085 ntBASIC13.92□□□□□ -0.18
Tff1Q08423 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tff1Q08423 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.91□□□□□ -0.18
Tff1Q08423 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.91□□□□□ -0.18
Tff1Q08423 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.91□□□□□ -0.18
Tff1Q08423 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Tff1Q08423 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tff1Q08423 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tff1Q08423 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tff1Q08423 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tff1Q08423 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tff1Q08423 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.9□□□□□ -0.18
Tff1Q08423 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tff1Q08423 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tff1Q08423 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tff1Q08423 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.9□□□□□ -0.18
Tff1Q08423 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Tff1Q08423 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.9□□□□□ -0.18
Tff1Q08423 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.9□□□□□ -0.18
Tff1Q08423 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Tff1Q08423 Gm10231-201ENSMUST00000181584 441 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms