Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC25.77■■□□□ 1.72
Col17a1Q07563 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC25.77■■□□□ 1.72
Col17a1Q07563 Mir1938-201ENSMUST00000158746 100 ntBASIC25.77■■□□□ 1.72
Col17a1Q07563 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
Col17a1Q07563 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Col17a1Q07563 Gm45167-201ENSMUST00000208007 322 ntBASIC25.77■■□□□ 1.72
Col17a1Q07563 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC25.77■■□□□ 1.72
Col17a1Q07563 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col17a1Q07563 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Col17a1Q07563 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col17a1Q07563 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col17a1Q07563 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col17a1Q07563 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col17a1Q07563 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Col17a1Q07563 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col17a1Q07563 Gm9172-201ENSMUST00000212092 954 ntBASIC25.76■■□□□ 1.71
Col17a1Q07563 Gm45747-201ENSMUST00000212203 999 ntBASIC25.76■■□□□ 1.71
Col17a1Q07563 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col17a1Q07563 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Col17a1Q07563 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Col17a1Q07563 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col17a1Q07563 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Col17a1Q07563 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col17a1Q07563 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col17a1Q07563 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col17a1Q07563 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC25.75■■□□□ 1.71
Col17a1Q07563 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Col17a1Q07563 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col17a1Q07563 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
Col17a1Q07563 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col17a1Q07563 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col17a1Q07563 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col17a1Q07563 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Col17a1Q07563 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC25.75■■□□□ 1.71
Col17a1Q07563 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Col17a1Q07563 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Col17a1Q07563 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col17a1Q07563 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col17a1Q07563 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Col17a1Q07563 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC25.74■■□□□ 1.71
Col17a1Q07563 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Col17a1Q07563 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC25.74■■□□□ 1.71
Col17a1Q07563 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col17a1Q07563 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col17a1Q07563 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col17a1Q07563 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC25.74■■□□□ 1.71
Col17a1Q07563 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Col17a1Q07563 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC25.73■■□□□ 1.71
Col17a1Q07563 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
Col17a1Q07563 Gm13223-201ENSMUST00000118609 747 ntBASIC25.73■■□□□ 1.71
Col17a1Q07563 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Col17a1Q07563 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col17a1Q07563 Gm22065-201ENSMUST00000103753 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm22066-201ENSMUST00000103761 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm24932-201ENSMUST00000103763 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm24115-201ENSMUST00000103799 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm22190-201ENSMUST00000103827 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm22191-201ENSMUST00000103831 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm24721-201ENSMUST00000103849 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm28018-201ENSMUST00000103869 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm26399-201ENSMUST00000103937 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm7336-201ENSMUST00000107041 1232 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Col17a1Q07563 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm25349-201ENSMUST00000177728 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm23616-201ENSMUST00000177797 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm25871-201ENSMUST00000177816 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm24752-201ENSMUST00000178240 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm24496-201ENSMUST00000178287 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm25649-201ENSMUST00000178476 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm25548-201ENSMUST00000178681 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm23147-201ENSMUST00000178841 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm26095-201ENSMUST00000179270 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm22171-201ENSMUST00000179283 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm23936-201ENSMUST00000179354 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm22619-201ENSMUST00000179516 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm25255-201ENSMUST00000179579 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm24755-201ENSMUST00000179691 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm26506-201ENSMUST00000179692 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm25086-201ENSMUST00000179931 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm23243-201ENSMUST00000180047 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm24659-201ENSMUST00000180212 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm24169-201ENSMUST00000180244 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm23689-201ENSMUST00000180354 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm27359-201ENSMUST00000184153 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm27785-201ENSMUST00000184268 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm27466-201ENSMUST00000184396 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Gm27703-201ENSMUST00000184836 110 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Hsf1-204ENSMUST00000226872 2104 ntBASIC25.72■■□□□ 1.71
Col17a1Q07563 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms