Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col10a1Q05306 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col10a1Q05306 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col10a1Q05306 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Col10a1Q05306 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Actl10-202ENSMUST00000226583 1501 ntBASIC15.42■□□□□ 0.06
Col10a1Q05306 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col10a1Q05306 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col10a1Q05306 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col10a1Q05306 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Gm22697-201ENSMUST00000175194 63 ntBASIC15.41■□□□□ 0.06
Col10a1Q05306 Mir1668-201ENSMUST00000184114 107 ntBASIC15.41■□□□□ 0.06
Col10a1Q05306 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.41■□□□□ 0.06
Col10a1Q05306 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.41■□□□□ 0.06
Col10a1Q05306 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col10a1Q05306 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col10a1Q05306 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Col10a1Q05306 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.4■□□□□ 0.06
Col10a1Q05306 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.4■□□□□ 0.06
Col10a1Q05306 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.4■□□□□ 0.06
Col10a1Q05306 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Col10a1Q05306 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Col10a1Q05306 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col10a1Q05306 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Col10a1Q05306 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.39■□□□□ 0.06
Col10a1Q05306 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Col10a1Q05306 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.39■□□□□ 0.05
Col10a1Q05306 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.39■□□□□ 0.05
Col10a1Q05306 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Col10a1Q05306 Gm18101-201ENSMUST00000215769 548 ntBASIC15.39■□□□□ 0.05
Col10a1Q05306 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col10a1Q05306 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Col10a1Q05306 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Col10a1Q05306 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col10a1Q05306 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.39■□□□□ 0.05
Col10a1Q05306 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col10a1Q05306 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.38■□□□□ 0.05
Col10a1Q05306 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col10a1Q05306 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col10a1Q05306 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col10a1Q05306 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col10a1Q05306 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col10a1Q05306 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Col10a1Q05306 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms