Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Npas1P97459 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.06□□□□□ -0.16
Npas1P97459 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.06□□□□□ -0.16
Npas1P97459 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Npas1P97459 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Npas1P97459 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Npas1P97459 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas1P97459 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.05□□□□□ -0.16
Npas1P97459 Gm7291-201ENSMUST00000199147 382 ntBASIC14.05□□□□□ -0.16
Npas1P97459 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.05□□□□□ -0.16
Npas1P97459 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Npas1P97459 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Npas1P97459 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.05□□□□□ -0.16
Npas1P97459 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Npas1P97459 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas1P97459 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Npas1P97459 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.04□□□□□ -0.16
Npas1P97459 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.04□□□□□ -0.16
Npas1P97459 Gm38285-201ENSMUST00000192928 922 ntBASIC14.04□□□□□ -0.16
Npas1P97459 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.04□□□□□ -0.16
Npas1P97459 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Npas1P97459 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.04□□□□□ -0.16
Npas1P97459 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Npas1P97459 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Npas1P97459 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Npas1P97459 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Npas1P97459 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.04□□□□□ -0.16
Npas1P97459 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas1P97459 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.04□□□□□ -0.16
Npas1P97459 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Npas1P97459 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Npas1P97459 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.03□□□□□ -0.16
Npas1P97459 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.03□□□□□ -0.16
Npas1P97459 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms