Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SgcaP82350 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SgcaP82350 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.06□□□□□ -0.16
SgcaP82350 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SgcaP82350 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.06□□□□□ -0.16
SgcaP82350 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.06□□□□□ -0.16
SgcaP82350 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.06□□□□□ -0.16
SgcaP82350 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcaP82350 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SgcaP82350 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SgcaP82350 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SgcaP82350 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SgcaP82350 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SgcaP82350 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcaP82350 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
SgcaP82350 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.04□□□□□ -0.16
SgcaP82350 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.04□□□□□ -0.16
SgcaP82350 Gm7514-201ENSMUST00000209475 934 ntBASIC14.04□□□□□ -0.16
SgcaP82350 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SgcaP82350 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SgcaP82350 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
SgcaP82350 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SgcaP82350 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcaP82350 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SgcaP82350 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SgcaP82350 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.03□□□□□ -0.16
SgcaP82350 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.03□□□□□ -0.16
SgcaP82350 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.03□□□□□ -0.16
SgcaP82350 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SgcaP82350 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms