Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm21559-201ENSMUST00000220638 855 ntBASIC14.93□□□□□ -0.02
SgcbP82349 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Gm8587-201ENSMUST00000076538 843 ntBASIC14.93□□□□□ -0.02
SgcbP82349 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SgcbP82349 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SgcbP82349 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.92□□□□□ -0.02
SgcbP82349 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SgcbP82349 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SgcbP82349 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SgcbP82349 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SgcbP82349 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SgcbP82349 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SgcbP82349 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.91□□□□□ -0.02
SgcbP82349 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SgcbP82349 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.91□□□□□ -0.02
SgcbP82349 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SgcbP82349 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SgcbP82349 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SgcbP82349 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SgcbP82349 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Gm6659-201ENSMUST00000174752 547 ntBASIC14.9□□□□□ -0.02
SgcbP82349 Gm23634-201ENSMUST00000175071 91 ntBASIC14.9□□□□□ -0.02
SgcbP82349 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.9□□□□□ -0.02
SgcbP82349 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SgcbP82349 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SgcbP82349 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Gm10566-201ENSMUST00000086739 996 ntBASIC14.9□□□□□ -0.02
SgcbP82349 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SgcbP82349 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.9□□□□□ -0.02
SgcbP82349 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SgcbP82349 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.89□□□□□ -0.03
SgcbP82349 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SgcbP82349 Actl10-202ENSMUST00000226583 1501 ntBASIC14.89□□□□□ -0.03
SgcbP82349 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SgcbP82349 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcbP82349 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms