Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.49■□□□□ 0.23
SgcgP82348 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SgcgP82348 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.49■□□□□ 0.23
SgcgP82348 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.49■□□□□ 0.23
SgcgP82348 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SgcgP82348 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcgP82348 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.48■□□□□ 0.23
SgcgP82348 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Gm28033-201ENSMUST00000184224 96 ntBASIC16.48■□□□□ 0.23
SgcgP82348 Gm27742-201ENSMUST00000184667 60 ntBASIC16.48■□□□□ 0.23
SgcgP82348 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SgcgP82348 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SgcgP82348 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcgP82348 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SgcgP82348 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.47■□□□□ 0.23
SgcgP82348 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SgcgP82348 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.47■□□□□ 0.23
SgcgP82348 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.47■□□□□ 0.23
SgcgP82348 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.47■□□□□ 0.23
SgcgP82348 Olfr129-201ENSMUST00000122318 993 ntBASIC16.47■□□□□ 0.23
SgcgP82348 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.47■□□□□ 0.23
SgcgP82348 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.47■□□□□ 0.23
SgcgP82348 Gm45328-201ENSMUST00000210942 917 ntBASIC16.47■□□□□ 0.23
SgcgP82348 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SgcgP82348 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.47■□□□□ 0.23
SgcgP82348 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.47■□□□□ 0.23
SgcgP82348 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcgP82348 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SgcgP82348 Gm27741-201ENSMUST00000185060 237 ntBASIC16.46■□□□□ 0.23
SgcgP82348 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.46■□□□□ 0.23
SgcgP82348 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SgcgP82348 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SgcgP82348 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SgcgP82348 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SgcgP82348 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SgcgP82348 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcgP82348 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcgP82348 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcgP82348 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcgP82348 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SgcgP82348 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms