Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Atf1P81269 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Atf1P81269 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atf1P81269 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Atf1P81269 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.46□□□□□ -0.09
Atf1P81269 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Atf1P81269 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.46□□□□□ -0.09
Atf1P81269 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.46□□□□□ -0.09
Atf1P81269 Odf3b-204ENSMUST00000227834 930 ntBASIC14.46□□□□□ -0.09
Atf1P81269 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Atf1P81269 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Atf1P81269 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atf1P81269 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atf1P81269 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Atf1P81269 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atf1P81269 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atf1P81269 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Atf1P81269 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atf1P81269 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Atf1P81269 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atf1P81269 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atf1P81269 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Atf1P81269 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Atf1P81269 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Atf1P81269 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.45□□□□□ -0.1
Atf1P81269 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.45□□□□□ -0.1
Atf1P81269 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Atf1P81269 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.45□□□□□ -0.1
Atf1P81269 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf1P81269 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.44□□□□□ -0.1
Atf1P81269 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.44□□□□□ -0.1
Atf1P81269 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Atf1P81269 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Atf1P81269 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.44□□□□□ -0.1
Atf1P81269 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.44□□□□□ -0.1
Atf1P81269 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.44□□□□□ -0.1
Atf1P81269 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf1P81269 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms