Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ufd1P70362 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ufd1P70362 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.41□□□□□ -0.1
Ufd1P70362 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ufd1P70362 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ufd1P70362 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.4□□□□□ -0.1
Ufd1P70362 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ufd1P70362 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.4□□□□□ -0.1
Ufd1P70362 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ufd1P70362 Gm13234-201ENSMUST00000120010 747 ntBASIC14.4□□□□□ -0.1
Ufd1P70362 Gm12821-201ENSMUST00000120022 600 ntBASIC14.4□□□□□ -0.1
Ufd1P70362 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ufd1P70362 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.4□□□□□ -0.1
Ufd1P70362 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Ufd1P70362 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ufd1P70362 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.4□□□□□ -0.1
Ufd1P70362 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ufd1P70362 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ufd1P70362 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.4□□□□□ -0.1
Ufd1P70362 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.4□□□□□ -0.1
Ufd1P70362 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.4□□□□□ -0.1
Ufd1P70362 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ufd1P70362 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ufd1P70362 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.39□□□□□ -0.11
Ufd1P70362 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Nespas-201ENSMUST00000143738 1083 ntBASIC14.39□□□□□ -0.11
Ufd1P70362 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.39□□□□□ -0.11
Ufd1P70362 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ufd1P70362 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ufd1P70362 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.38□□□□□ -0.11
Ufd1P70362 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Gm6420-201ENSMUST00000193885 723 ntBASIC14.38□□□□□ -0.11
Ufd1P70362 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ufd1P70362 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Ufd1P70362 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ufd1P70362 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms