Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim4P70271 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Gm18959-201ENSMUST00000208954 655 ntBASIC13.91□□□□□ -0.18
Pdlim4P70271 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim4P70271 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim4P70271 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.9□□□□□ -0.18
Pdlim4P70271 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pdlim4P70271 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim4P70271 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim4P70271 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pdlim4P70271 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Pdlim4P70271 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pdlim4P70271 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pdlim4P70271 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.9□□□□□ -0.19
Pdlim4P70271 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pdlim4P70271 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim4P70271 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim4P70271 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pdlim4P70271 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim4P70271 Gm16061-201ENSMUST00000122167 857 ntBASIC13.89□□□□□ -0.19
Pdlim4P70271 Gm13474-201ENSMUST00000122466 815 ntBASIC13.89□□□□□ -0.19
Pdlim4P70271 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.89□□□□□ -0.19
Pdlim4P70271 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.89□□□□□ -0.19
Pdlim4P70271 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim4P70271 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim4P70271 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim4P70271 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim4P70271 Haglr-201ENSMUST00000100000 2085 ntBASIC13.89□□□□□ -0.19
Pdlim4P70271 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pdlim4P70271 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim4P70271 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.88□□□□□ -0.19
Pdlim4P70271 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pdlim4P70271 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.88□□□□□ -0.19
Pdlim4P70271 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.88□□□□□ -0.19
Pdlim4P70271 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms