Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.6■□□□□ 0.25
Crnkl1P63154 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.6■□□□□ 0.25
Crnkl1P63154 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crnkl1P63154 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Crnkl1P63154 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crnkl1P63154 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crnkl1P63154 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
Crnkl1P63154 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Crnkl1P63154 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.59■□□□□ 0.25
Crnkl1P63154 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.59■□□□□ 0.25
Crnkl1P63154 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crnkl1P63154 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crnkl1P63154 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crnkl1P63154 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.59■□□□□ 0.25
Crnkl1P63154 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crnkl1P63154 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crnkl1P63154 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Crnkl1P63154 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Crnkl1P63154 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Crnkl1P63154 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Crnkl1P63154 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Crnkl1P63154 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.58■□□□□ 0.25
Crnkl1P63154 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Crnkl1P63154 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Crnkl1P63154 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crnkl1P63154 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crnkl1P63154 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crnkl1P63154 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Crnkl1P63154 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Crnkl1P63154 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.58■□□□□ 0.24
Crnkl1P63154 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.58■□□□□ 0.24
Crnkl1P63154 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crnkl1P63154 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crnkl1P63154 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crnkl1P63154 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crnkl1P63154 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crnkl1P63154 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.57■□□□□ 0.24
Crnkl1P63154 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.57■□□□□ 0.24
Crnkl1P63154 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.57■□□□□ 0.24
Crnkl1P63154 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Crnkl1P63154 Gm12441-201ENSMUST00000121806 588 ntBASIC16.57■□□□□ 0.24
Crnkl1P63154 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.57■□□□□ 0.24
Crnkl1P63154 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.57■□□□□ 0.24
Crnkl1P63154 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.57■□□□□ 0.24
Crnkl1P63154 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Gm4968-201ENSMUST00000071458 858 ntBASIC16.57■□□□□ 0.24
Crnkl1P63154 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.57■□□□□ 0.24
Crnkl1P63154 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.57■□□□□ 0.24
Crnkl1P63154 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Crnkl1P63154 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.56■□□□□ 0.24
Crnkl1P63154 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.56■□□□□ 0.24
Crnkl1P63154 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.56■□□□□ 0.24
Crnkl1P63154 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.56■□□□□ 0.24
Crnkl1P63154 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.56■□□□□ 0.24
Crnkl1P63154 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Crnkl1P63154 Rab3c-203ENSMUST00000224180 967 ntBASIC16.56■□□□□ 0.24
Crnkl1P63154 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.56■□□□□ 0.24
Crnkl1P63154 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms