Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nub1P54729 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Nub1P54729 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nub1P54729 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.98■□□□□ 0.47
Nub1P54729 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Gm7213-201ENSMUST00000215977 950 ntBASIC17.98■□□□□ 0.47
Nub1P54729 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.98■□□□□ 0.47
Nub1P54729 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.98■□□□□ 0.47
Nub1P54729 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.98■□□□□ 0.47
Nub1P54729 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.98■□□□□ 0.47
Nub1P54729 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.98■□□□□ 0.47
Nub1P54729 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nub1P54729 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nub1P54729 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Nub1P54729 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.97■□□□□ 0.47
Nub1P54729 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nub1P54729 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.97■□□□□ 0.47
Nub1P54729 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.97■□□□□ 0.47
Nub1P54729 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nub1P54729 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Nub1P54729 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Nub1P54729 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.96■□□□□ 0.47
Nub1P54729 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nub1P54729 Actl10-202ENSMUST00000226583 1501 ntBASIC17.96■□□□□ 0.47
Nub1P54729 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nub1P54729 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nub1P54729 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nub1P54729 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nub1P54729 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nub1P54729 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nub1P54729 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Nub1P54729 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.95■□□□□ 0.46
Nub1P54729 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Nub1P54729 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.95■□□□□ 0.46
Nub1P54729 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nub1P54729 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nub1P54729 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nub1P54729 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Nub1P54729 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Nub1P54729 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.94■□□□□ 0.46
Nub1P54729 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms