Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lbx1P52955 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.13■□□□□ 0.17
Lbx1P52955 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.13■□□□□ 0.17
Lbx1P52955 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.13■□□□□ 0.17
Lbx1P52955 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.13■□□□□ 0.17
Lbx1P52955 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lbx1P52955 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Lbx1P52955 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lbx1P52955 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lbx1P52955 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Lbx1P52955 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.12■□□□□ 0.17
Lbx1P52955 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Gm5866-201ENSMUST00000177881 973 ntBASIC16.12■□□□□ 0.17
Lbx1P52955 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.12■□□□□ 0.17
Lbx1P52955 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.12■□□□□ 0.17
Lbx1P52955 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.12■□□□□ 0.17
Lbx1P52955 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lbx1P52955 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.12■□□□□ 0.17
Lbx1P52955 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lbx1P52955 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.11■□□□□ 0.17
Lbx1P52955 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.11■□□□□ 0.17
Lbx1P52955 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Lbx1P52955 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.11■□□□□ 0.17
Lbx1P52955 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lbx1P52955 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Lbx1P52955 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lbx1P52955 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.1■□□□□ 0.17
Lbx1P52955 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.1■□□□□ 0.17
Lbx1P52955 Gm7222-201ENSMUST00000117512 906 ntBASIC16.1■□□□□ 0.17
Lbx1P52955 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.1■□□□□ 0.17
Lbx1P52955 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Lbx1P52955 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Lbx1P52955 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Lbx1P52955 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.1■□□□□ 0.17
Lbx1P52955 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.1■□□□□ 0.17
Lbx1P52955 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Lbx1P52955 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lbx1P52955 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.09■□□□□ 0.17
Lbx1P52955 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.09■□□□□ 0.17
Lbx1P52955 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.09■□□□□ 0.17
Lbx1P52955 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Gm5312-201ENSMUST00000203728 547 ntBASIC16.09■□□□□ 0.17
Lbx1P52955 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Lbx1P52955 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.09■□□□□ 0.17
Lbx1P52955 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Lbx1P52955 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lbx1P52955 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms