Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LmnaP48678 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.3■□□□□ 0.36
LmnaP48678 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.3■□□□□ 0.36
LmnaP48678 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.3■□□□□ 0.36
LmnaP48678 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LmnaP48678 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.3■□□□□ 0.36
LmnaP48678 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.3■□□□□ 0.36
LmnaP48678 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LmnaP48678 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LmnaP48678 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.29■□□□□ 0.36
LmnaP48678 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LmnaP48678 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LmnaP48678 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LmnaP48678 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LmnaP48678 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.28■□□□□ 0.36
LmnaP48678 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LmnaP48678 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LmnaP48678 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.27■□□□□ 0.36
LmnaP48678 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.27■□□□□ 0.36
LmnaP48678 Gm11950-201ENSMUST00000121615 838 ntBASIC17.27■□□□□ 0.36
LmnaP48678 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.27■□□□□ 0.36
LmnaP48678 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LmnaP48678 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LmnaP48678 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LmnaP48678 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LmnaP48678 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.27■□□□□ 0.35
LmnaP48678 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LmnaP48678 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LmnaP48678 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LmnaP48678 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LmnaP48678 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LmnaP48678 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LmnaP48678 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LmnaP48678 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LmnaP48678 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LmnaP48678 Gm11355-201ENSMUST00000121120 306 ntBASIC17.26■□□□□ 0.35
LmnaP48678 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LmnaP48678 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LmnaP48678 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LmnaP48678 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms