Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.12■□□□□ 0.01
Rfx3P48381 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx3P48381 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.11■□□□□ 0.01
Rfx3P48381 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.11■□□□□ 0.01
Rfx3P48381 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rfx3P48381 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx3P48381 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfx3P48381 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfx3P48381 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Rfx3P48381 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rfx3P48381 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.1■□□□□ 0.01
Rfx3P48381 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.1■□□□□ 0.01
Rfx3P48381 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.1■□□□□ 0.01
Rfx3P48381 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx3P48381 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rfx3P48381 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfx3P48381 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rfx3P48381 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rfx3P48381 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.09■□□□□ 0.01
Rfx3P48381 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.09■□□□□ 0.01
Rfx3P48381 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.09■□□□□ 0.01
Rfx3P48381 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfx3P48381 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx3P48381 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfx3P48381 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfx3P48381 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.08■□□□□ 0.01
Rfx3P48381 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.08■□□□□ 0.01
Rfx3P48381 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.08■□□□□ 0
Rfx3P48381 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.08■□□□□ 0
Rfx3P48381 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rfx3P48381 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rfx3P48381 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfx3P48381 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfx3P48381 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms