Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli1P47806 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gli1P47806 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gli1P47806 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gli1P47806 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.33■□□□□ 0.21
Gli1P47806 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gli1P47806 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gli1P47806 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.33■□□□□ 0.2
Gli1P47806 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.33■□□□□ 0.2
Gli1P47806 Gm21362-201ENSMUST00000194272 928 ntBASIC16.33■□□□□ 0.2
Gli1P47806 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.33■□□□□ 0.2
Gli1P47806 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli1P47806 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli1P47806 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli1P47806 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli1P47806 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli1P47806 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.33■□□□□ 0.2
Gli1P47806 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gli1P47806 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli1P47806 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli1P47806 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gli1P47806 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Gli1P47806 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Gli1P47806 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.32■□□□□ 0.2
Gli1P47806 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Gli1P47806 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli1P47806 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.31■□□□□ 0.2
Gli1P47806 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gli1P47806 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.31■□□□□ 0.2
Gli1P47806 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Gli1P47806 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Gli1P47806 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.31■□□□□ 0.2
Gli1P47806 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.31■□□□□ 0.2
Gli1P47806 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.31■□□□□ 0.2
Gli1P47806 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.31■□□□□ 0.2
Gli1P47806 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.31■□□□□ 0.2
Gli1P47806 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.31■□□□□ 0.2
Gli1P47806 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli1P47806 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.31■□□□□ 0.2
Gli1P47806 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gli1P47806 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.3■□□□□ 0.2
Gli1P47806 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.3■□□□□ 0.2
Gli1P47806 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.3■□□□□ 0.2
Gli1P47806 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.3■□□□□ 0.2
Gli1P47806 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.3■□□□□ 0.2
Gli1P47806 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.3■□□□□ 0.2
Gli1P47806 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 Gm10819-201ENSMUST00000099988 561 ntBASIC16.3■□□□□ 0.2
Gli1P47806 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gli1P47806 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms