Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msh2P43247 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msh2P43247 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Msh2P43247 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Msh2P43247 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Msh2P43247 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msh2P43247 Gm715-201ENSMUST00000117865 831 ntBASIC17.24■□□□□ 0.35
Msh2P43247 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msh2P43247 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh2P43247 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.24■□□□□ 0.35
Msh2P43247 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh2P43247 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Msh2P43247 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh2P43247 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.23■□□□□ 0.35
Msh2P43247 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Msh2P43247 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Gm10517-202ENSMUST00000192970 758 ntBASIC17.23■□□□□ 0.35
Msh2P43247 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Msh2P43247 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Msh2P43247 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh2P43247 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.22■□□□□ 0.35
Msh2P43247 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.22■□□□□ 0.35
Msh2P43247 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.22■□□□□ 0.35
Msh2P43247 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Msh2P43247 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Msh2P43247 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Msh2P43247 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Msh2P43247 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh2P43247 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Msh2P43247 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.21■□□□□ 0.35
Msh2P43247 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Msh2P43247 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.21■□□□□ 0.35
Msh2P43247 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.21■□□□□ 0.35
Msh2P43247 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.21■□□□□ 0.35
Msh2P43247 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Msh2P43247 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Msh2P43247 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh2P43247 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.21■□□□□ 0.34
Msh2P43247 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Msh2P43247 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Msh2P43247 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.2■□□□□ 0.34
Msh2P43247 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Msh2P43247 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Msh2P43247 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Gm4974-201ENSMUST00000209974 875 ntBASIC17.2■□□□□ 0.34
Msh2P43247 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Msh2P43247 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.2■□□□□ 0.34
Msh2P43247 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Msh2P43247 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh2P43247 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms