Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Mmp13P33435 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.13■□□□□ 0.33
Mmp13P33435 Timm23-208ENSMUST00000226683 750 ntBASIC17.13■□□□□ 0.33
Mmp13P33435 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Mmp13P33435 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.12■□□□□ 0.33
Mmp13P33435 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Mmp13P33435 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mmp13P33435 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.12■□□□□ 0.33
Mmp13P33435 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.12■□□□□ 0.33
Mmp13P33435 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Mmp13P33435 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mmp13P33435 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.12■□□□□ 0.33
Mmp13P33435 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mmp13P33435 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Mmp13P33435 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp13P33435 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.12■□□□□ 0.33
Mmp13P33435 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mmp13P33435 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Mmp13P33435 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Mmp13P33435 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.11■□□□□ 0.33
Mmp13P33435 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mmp13P33435 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.11■□□□□ 0.33
Mmp13P33435 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Mmp13P33435 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.11■□□□□ 0.33
Mmp13P33435 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp13P33435 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Mmp13P33435 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Mmp13P33435 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Mmp13P33435 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.1■□□□□ 0.33
Mmp13P33435 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.1■□□□□ 0.33
Mmp13P33435 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.1■□□□□ 0.33
Mmp13P33435 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.1■□□□□ 0.33
Mmp13P33435 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.1■□□□□ 0.33
Mmp13P33435 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Gm4974-201ENSMUST00000209974 875 ntBASIC17.1■□□□□ 0.33
Mmp13P33435 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.1■□□□□ 0.33
Mmp13P33435 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp13P33435 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Mmp13P33435 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Mmp13P33435 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms