Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.43□□□□□ -0.1
Slc6a1P31648 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Slc6a1P31648 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Slc6a1P31648 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.42□□□□□ -0.1
Slc6a1P31648 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Gm13148-201ENSMUST00000118892 745 ntBASIC14.42□□□□□ -0.1
Slc6a1P31648 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Slc6a1P31648 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Slc6a1P31648 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a1P31648 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Slc6a1P31648 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.41□□□□□ -0.1
Slc6a1P31648 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Slc6a1P31648 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
Slc6a1P31648 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Slc6a1P31648 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.41□□□□□ -0.1
Slc6a1P31648 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Slc6a1P31648 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Slc6a1P31648 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.41□□□□□ -0.1
Slc6a1P31648 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a1P31648 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Slc6a1P31648 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms