Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Asic1-205ENSMUST00000228185 1818 ntBASIC16.84■□□□□ 0.29
RxrbP28704 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
RxrbP28704 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RxrbP28704 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.84■□□□□ 0.29
RxrbP28704 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.84■□□□□ 0.29
RxrbP28704 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RxrbP28704 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RxrbP28704 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
RxrbP28704 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RxrbP28704 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RxrbP28704 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
RxrbP28704 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Gm15375-201ENSMUST00000119510 849 ntBASIC16.83■□□□□ 0.28
RxrbP28704 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.83■□□□□ 0.28
RxrbP28704 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.83■□□□□ 0.28
RxrbP28704 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.83■□□□□ 0.28
RxrbP28704 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Mtag2-201ENSMUST00000058665 714 ntBASIC16.83■□□□□ 0.28
RxrbP28704 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RxrbP28704 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
RxrbP28704 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.83■□□□□ 0.28
RxrbP28704 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RxrbP28704 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RxrbP28704 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RxrbP28704 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.82■□□□□ 0.28
RxrbP28704 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.81■□□□□ 0.28
RxrbP28704 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.81■□□□□ 0.28
RxrbP28704 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.81■□□□□ 0.28
RxrbP28704 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.81■□□□□ 0.28
RxrbP28704 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RxrbP28704 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.81■□□□□ 0.28
RxrbP28704 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RxrbP28704 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RxrbP28704 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RxrbP28704 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.8■□□□□ 0.28
RxrbP28704 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Gm6576-201ENSMUST00000169678 883 ntBASIC16.8■□□□□ 0.28
RxrbP28704 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RxrbP28704 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RxrbP28704 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RxrbP28704 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RxrbP28704 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RxrbP28704 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
RxrbP28704 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms