Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pde6aP27664 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.4■□□□□ 0.7
Pde6aP27664 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pde6aP27664 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.39■□□□□ 0.69
Pde6aP27664 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.39■□□□□ 0.69
Pde6aP27664 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pde6aP27664 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.39■□□□□ 0.69
Pde6aP27664 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6aP27664 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pde6aP27664 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.38■□□□□ 0.69
Pde6aP27664 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pde6aP27664 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6aP27664 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.37■□□□□ 0.69
Pde6aP27664 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pde6aP27664 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.37■□□□□ 0.69
Pde6aP27664 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.37■□□□□ 0.69
Pde6aP27664 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6aP27664 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pde6aP27664 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.36■□□□□ 0.69
Pde6aP27664 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Pde6aP27664 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.36■□□□□ 0.69
Pde6aP27664 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.36■□□□□ 0.69
Pde6aP27664 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.36■□□□□ 0.69
Pde6aP27664 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pde6aP27664 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6aP27664 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.35■□□□□ 0.69
Pde6aP27664 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.35■□□□□ 0.69
Pde6aP27664 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.35■□□□□ 0.69
Pde6aP27664 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.35■□□□□ 0.69
Pde6aP27664 Gm7977-201ENSMUST00000193787 748 ntBASIC19.35■□□□□ 0.69
Pde6aP27664 Gm5587-201ENSMUST00000206270 674 ntBASIC19.35■□□□□ 0.69
Pde6aP27664 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms