Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pde6bP23440 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pde6bP23440 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pde6bP23440 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Pde6bP23440 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pde6bP23440 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pde6bP23440 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6bP23440 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6bP23440 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6bP23440 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6bP23440 Olfr129-201ENSMUST00000122318 993 ntBASIC18.2■□□□□ 0.5
Pde6bP23440 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.2■□□□□ 0.5
Pde6bP23440 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pde6bP23440 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6bP23440 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Pde6bP23440 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6bP23440 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pde6bP23440 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6bP23440 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.2■□□□□ 0.5
Pde6bP23440 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6bP23440 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pde6bP23440 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.2■□□□□ 0.5
Pde6bP23440 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6bP23440 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6bP23440 Gm11336-201ENSMUST00000118168 334 ntBASIC18.19■□□□□ 0.5
Pde6bP23440 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.19■□□□□ 0.5
Pde6bP23440 Gm27000-201ENSMUST00000182943 842 ntBASIC18.19■□□□□ 0.5
Pde6bP23440 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6bP23440 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6bP23440 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.19■□□□□ 0.5
Pde6bP23440 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6bP23440 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6bP23440 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6bP23440 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6bP23440 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.18■□□□□ 0.5
Pde6bP23440 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pde6bP23440 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.18■□□□□ 0.5
Pde6bP23440 Gm18115-201ENSMUST00000221209 621 ntBASIC18.18■□□□□ 0.5
Pde6bP23440 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.18■□□□□ 0.5
Pde6bP23440 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Pde6bP23440 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.18■□□□□ 0.5
Pde6bP23440 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6bP23440 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pde6bP23440 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pde6bP23440 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pde6bP23440 Gm24589-201ENSMUST00000116692 94 ntBASIC18.17■□□□□ 0.5
Pde6bP23440 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pde6bP23440 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pde6bP23440 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6bP23440 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6bP23440 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6bP23440 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6bP23440 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pde6bP23440 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6bP23440 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.16■□□□□ 0.5
Pde6bP23440 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.16■□□□□ 0.5
Pde6bP23440 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.16■□□□□ 0.5
Pde6bP23440 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pde6bP23440 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pde6bP23440 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6bP23440 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6bP23440 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6bP23440 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6bP23440 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.16■□□□□ 0.5
Pde6bP23440 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6bP23440 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pde6bP23440 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Pde6bP23440 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pde6bP23440 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms