Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 Reep4-203ENSMUST00000226563 1444 ntBASIC17.1■□□□□ 0.33
VimP20152 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VimP20152 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
VimP20152 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.09■□□□□ 0.33
VimP20152 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VimP20152 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VimP20152 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.09■□□□□ 0.33
VimP20152 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
VimP20152 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VimP20152 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
VimP20152 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.09■□□□□ 0.33
VimP20152 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VimP20152 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
VimP20152 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VimP20152 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VimP20152 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VimP20152 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
VimP20152 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VimP20152 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VimP20152 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VimP20152 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.08■□□□□ 0.33
VimP20152 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
VimP20152 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
VimP20152 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VimP20152 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VimP20152 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.08■□□□□ 0.32
VimP20152 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.08■□□□□ 0.32
VimP20152 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VimP20152 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.07■□□□□ 0.32
VimP20152 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.07■□□□□ 0.32
VimP20152 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
VimP20152 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VimP20152 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VimP20152 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VimP20152 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.07■□□□□ 0.32
VimP20152 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VimP20152 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VimP20152 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VimP20152 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VimP20152 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VimP20152 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VimP20152 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VimP20152 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
VimP20152 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.06■□□□□ 0.32
VimP20152 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VimP20152 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.06■□□□□ 0.32
VimP20152 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.06■□□□□ 0.32
VimP20152 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.06■□□□□ 0.32
VimP20152 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VimP20152 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.06■□□□□ 0.32
VimP20152 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.06■□□□□ 0.32
VimP20152 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VimP20152 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VimP20152 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.05■□□□□ 0.32
VimP20152 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VimP20152 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VimP20152 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VimP20152 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VimP20152 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VimP20152 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms