Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm42545-201ENSMUST00000202755 922 ntBASIC15.34■□□□□ 0.05
Hmgn1P18608 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn1P18608 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn1P18608 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Hmgn1P18608 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn1P18608 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Hmgn1P18608 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn1P18608 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn1P18608 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn1P18608 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn1P18608 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Hmgn1P18608 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn1P18608 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hmgn1P18608 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hmgn1P18608 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Gm12933-201ENSMUST00000120203 872 ntBASIC15.33■□□□□ 0.04
Hmgn1P18608 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.33■□□□□ 0.04
Hmgn1P18608 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.33■□□□□ 0.04
Hmgn1P18608 Gm10517-202ENSMUST00000192970 758 ntBASIC15.33■□□□□ 0.04
Hmgn1P18608 Gm37025-201ENSMUST00000195159 829 ntBASIC15.33■□□□□ 0.04
Hmgn1P18608 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hmgn1P18608 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.33■□□□□ 0.04
Hmgn1P18608 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn1P18608 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Hmgn1P18608 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Hmgn1P18608 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgn1P18608 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgn1P18608 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Gm12896-201ENSMUST00000118430 226 ntBASIC15.32■□□□□ 0.04
Hmgn1P18608 Gm12382-201ENSMUST00000122005 922 ntBASIC15.32■□□□□ 0.04
Hmgn1P18608 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hmgn1P18608 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.32■□□□□ 0.04
Hmgn1P18608 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.32■□□□□ 0.04
Hmgn1P18608 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.32■□□□□ 0.04
Hmgn1P18608 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgn1P18608 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.32■□□□□ 0.04
Hmgn1P18608 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn1P18608 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hmgn1P18608 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.31■□□□□ 0.04
Hmgn1P18608 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn1P18608 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgn1P18608 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn1P18608 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn1P18608 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn1P18608 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn1P18608 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn1P18608 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn1P18608 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn1P18608 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.31■□□□□ 0.04
Hmgn1P18608 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn1P18608 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hmgn1P18608 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hmgn1P18608 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.31■□□□□ 0.04
Hmgn1P18608 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgn1P18608 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hmgn1P18608 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgn1P18608 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Hmgn1P18608 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Hmgn1P18608 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgn1P18608 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Gm37292-201ENSMUST00000192062 758 ntBASIC15.3■□□□□ 0.04
Hmgn1P18608 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Hmgn1P18608 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
Hmgn1P18608 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms