Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cd44P15379 Gm15378-201ENSMUST00000121894 207 ntBASIC17.58■□□□□ 0.4
Cd44P15379 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cd44P15379 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.58■□□□□ 0.4
Cd44P15379 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd44P15379 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cd44P15379 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cd44P15379 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 Gm15039-201ENSMUST00000118914 875 ntBASIC17.57■□□□□ 0.4
Cd44P15379 Gm38027-201ENSMUST00000192315 235 ntBASIC17.57■□□□□ 0.4
Cd44P15379 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cd44P15379 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cd44P15379 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cd44P15379 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd44P15379 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd44P15379 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Cd44P15379 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd44P15379 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cd44P15379 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.56■□□□□ 0.4
Cd44P15379 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd44P15379 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cd44P15379 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cd44P15379 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd44P15379 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.55■□□□□ 0.4
Cd44P15379 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cd44P15379 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.55■□□□□ 0.4
Cd44P15379 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.55■□□□□ 0.4
Cd44P15379 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.55■□□□□ 0.4
Cd44P15379 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cd44P15379 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd44P15379 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.54■□□□□ 0.4
Cd44P15379 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Il3ra-202ENSMUST00000223589 738 ntBASIC17.54■□□□□ 0.4
Cd44P15379 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.54■□□□□ 0.4
Cd44P15379 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd44P15379 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms