Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.43■□□□□ 0.22
Srp54P14576 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srp54P14576 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srp54P14576 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srp54P14576 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srp54P14576 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srp54P14576 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srp54P14576 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srp54P14576 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srp54P14576 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Srp54P14576 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.43■□□□□ 0.22
Srp54P14576 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Srp54P14576 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.42■□□□□ 0.22
Srp54P14576 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Srp54P14576 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Srp54P14576 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.42■□□□□ 0.22
Srp54P14576 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.42■□□□□ 0.22
Srp54P14576 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Srp54P14576 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srp54P14576 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Srp54P14576 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Srp54P14576 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Srp54P14576 Gm13186-201ENSMUST00000118031 316 ntBASIC16.41■□□□□ 0.22
Srp54P14576 Gm11336-201ENSMUST00000118168 334 ntBASIC16.41■□□□□ 0.22
Srp54P14576 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.41■□□□□ 0.22
Srp54P14576 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.41■□□□□ 0.22
Srp54P14576 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.41■□□□□ 0.22
Srp54P14576 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.41■□□□□ 0.22
Srp54P14576 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srp54P14576 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.4■□□□□ 0.22
Srp54P14576 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.4■□□□□ 0.22
Srp54P14576 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.4■□□□□ 0.22
Srp54P14576 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Srp54P14576 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Srp54P14576 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Srp54P14576 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Srp54P14576 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54P14576 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Srp54P14576 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Srp54P14576 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54P14576 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54P14576 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54P14576 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54P14576 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54P14576 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54P14576 Gm17807-201ENSMUST00000186869 298 ntBASIC16.39■□□□□ 0.21
Srp54P14576 Gm45328-201ENSMUST00000210942 917 ntBASIC16.39■□□□□ 0.21
Srp54P14576 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.39■□□□□ 0.21
Srp54P14576 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Srp54P14576 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms