Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa6P09092 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa6P09092 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa6P09092 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa6P09092 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa6P09092 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa6P09092 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa6P09092 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa6P09092 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxa6P09092 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa6P09092 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa6P09092 Gm27742-201ENSMUST00000184667 60 ntBASIC14.38□□□□□ -0.11
Hoxa6P09092 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.38□□□□□ -0.11
Hoxa6P09092 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa6P09092 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxa6P09092 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Hoxa6P09092 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hoxa6P09092 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Gm11336-201ENSMUST00000118168 334 ntBASIC14.37□□□□□ -0.11
Hoxa6P09092 Gm17807-201ENSMUST00000186869 298 ntBASIC14.37□□□□□ -0.11
Hoxa6P09092 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hoxa6P09092 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa6P09092 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxa6P09092 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hoxa6P09092 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxa6P09092 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Gm18669-201ENSMUST00000216049 778 ntBASIC14.36□□□□□ -0.11
Hoxa6P09092 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxa6P09092 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa6P09092 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa6P09092 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa6P09092 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.35□□□□□ -0.11
Hoxa6P09092 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hoxa6P09092 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa6P09092 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa6P09092 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa6P09092 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxa6P09092 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxa6P09092 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxa6P09092 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxa6P09092 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.35□□□□□ -0.11
Hoxa6P09092 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxa6P09092 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxa6P09092 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa6P09092 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa6P09092 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa6P09092 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms