Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
P06344 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
P06344 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
P06344 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.9□□□□□ -0.02
P06344 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
P06344 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
P06344 Gm5587-201ENSMUST00000206270 674 ntBASIC14.9□□□□□ -0.02
P06344 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
P06344 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
P06344 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.9□□□□□ -0.02
P06344 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06344 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
P06344 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
P06344 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.89□□□□□ -0.03
P06344 Gm33142-201ENSMUST00000193913 867 ntBASIC14.89□□□□□ -0.03
P06344 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
P06344 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.89□□□□□ -0.03
P06344 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
P06344 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.89□□□□□ -0.03
P06344 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06344 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
P06344 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
P06344 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.88□□□□□ -0.03
P06344 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.88□□□□□ -0.03
P06344 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.88□□□□□ -0.03
P06344 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
P06344 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.88□□□□□ -0.03
P06344 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
P06344 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
P06344 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
P06344 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
P06344 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P06344 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
P06344 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
P06344 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
P06344 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.87□□□□□ -0.03
P06344 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.87□□□□□ -0.03
P06344 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
P06344 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms