Protein–RNA interactions for Protein: P01649

Ig kappa chain V-V regions, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01649 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.97□□□□□ -0.17
P01649 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Gm11950-201ENSMUST00000121615 838 ntBASIC13.97□□□□□ -0.17
P01649 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Gm6623-201ENSMUST00000173570 544 ntBASIC13.97□□□□□ -0.17
P01649 Gm33142-201ENSMUST00000193913 867 ntBASIC13.97□□□□□ -0.17
P01649 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
P01649 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.97□□□□□ -0.17
P01649 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P01649 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.97□□□□□ -0.17
P01649 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
P01649 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.97□□□□□ -0.17
P01649 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.96□□□□□ -0.17
P01649 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.96□□□□□ -0.17
P01649 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.96□□□□□ -0.17
P01649 Gm17808-201ENSMUST00000200859 894 ntBASIC13.96□□□□□ -0.17
P01649 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.96□□□□□ -0.17
P01649 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
P01649 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
P01649 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P01649 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
P01649 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
P01649 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
P01649 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
P01649 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
P01649 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
P01649 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P01649 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.95□□□□□ -0.18
P01649 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.95□□□□□ -0.18
P01649 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.95□□□□□ -0.18
P01649 Gm45328-201ENSMUST00000210942 917 ntBASIC13.95□□□□□ -0.18
P01649 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.95□□□□□ -0.18
P01649 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
P01649 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.95□□□□□ -0.18
P01649 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P01649 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P01649 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
P01649 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
P01649 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.94□□□□□ -0.18
P01649 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.94□□□□□ -0.18
P01649 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.94□□□□□ -0.18
P01649 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
P01649 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.94□□□□□ -0.18
P01649 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
P01649 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01649 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms