Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sp1O89090 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp1O89090 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp1O89090 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp1O89090 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sp1O89090 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sp1O89090 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp1O89090 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp1O89090 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sp1O89090 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.89■□□□□ 0.29
Sp1O89090 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp1O89090 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.88■□□□□ 0.29
Sp1O89090 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Sp1O89090 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.88■□□□□ 0.29
Sp1O89090 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.88■□□□□ 0.29
Sp1O89090 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Sp1O89090 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Sp1O89090 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.88■□□□□ 0.29
Sp1O89090 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sp1O89090 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sp1O89090 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sp1O89090 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sp1O89090 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.87■□□□□ 0.29
Sp1O89090 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sp1O89090 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp1O89090 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.87■□□□□ 0.29
Sp1O89090 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Sp1O89090 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sp1O89090 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.86■□□□□ 0.29
Sp1O89090 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sp1O89090 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.86■□□□□ 0.29
Sp1O89090 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Sp1O89090 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.86■□□□□ 0.29
Sp1O89090 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.86■□□□□ 0.29
Sp1O89090 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Sp1O89090 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp1O89090 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.85■□□□□ 0.29
Sp1O89090 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sp1O89090 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Sp1O89090 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.85■□□□□ 0.29
Sp1O89090 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.85■□□□□ 0.29
Sp1O89090 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.85■□□□□ 0.29
Sp1O89090 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.85■□□□□ 0.29
Sp1O89090 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.85■□□□□ 0.29
Sp1O89090 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp1O89090 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.84■□□□□ 0.29
Sp1O89090 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp1O89090 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp1O89090 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sp1O89090 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp1O89090 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sp1O89090 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp1O89090 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sp1O89090 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms