Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.09■□□□□ 0.33
ShdO88834 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.09■□□□□ 0.33
ShdO88834 Gm10566-201ENSMUST00000086739 996 ntBASIC17.09■□□□□ 0.33
ShdO88834 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.09■□□□□ 0.33
ShdO88834 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ShdO88834 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ShdO88834 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShdO88834 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ShdO88834 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.08■□□□□ 0.33
ShdO88834 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ShdO88834 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
ShdO88834 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ShdO88834 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ShdO88834 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShdO88834 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShdO88834 Gm16061-201ENSMUST00000122167 857 ntBASIC17.08■□□□□ 0.32
ShdO88834 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.08■□□□□ 0.32
ShdO88834 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShdO88834 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShdO88834 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
ShdO88834 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.08■□□□□ 0.32
ShdO88834 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ShdO88834 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ShdO88834 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.07■□□□□ 0.32
ShdO88834 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.07■□□□□ 0.32
ShdO88834 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Haglr-201ENSMUST00000100000 2085 ntBASIC17.07■□□□□ 0.32
ShdO88834 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ShdO88834 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShdO88834 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ShdO88834 Phf7-203ENSMUST00000226565 1971 ntBASIC17.06■□□□□ 0.32
ShdO88834 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.06■□□□□ 0.32
ShdO88834 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.06■□□□□ 0.32
ShdO88834 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShdO88834 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ShdO88834 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ShdO88834 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShdO88834 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ShdO88834 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShdO88834 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ShdO88834 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ShdO88834 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ShdO88834 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ShdO88834 Gm13186-201ENSMUST00000118031 316 ntBASIC17.05■□□□□ 0.32
ShdO88834 Gm7213-201ENSMUST00000215977 950 ntBASIC17.05■□□□□ 0.32
ShdO88834 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ShdO88834 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShdO88834 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
ShdO88834 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ShdO88834 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShdO88834 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ShdO88834 Actl10-202ENSMUST00000226583 1501 ntBASIC17.05■□□□□ 0.32
ShdO88834 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShdO88834 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ShdO88834 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ShdO88834 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.04■□□□□ 0.32
ShdO88834 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms