Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.05■□□□□ 0.16
Hcn3O88705 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.05■□□□□ 0.16
Hcn3O88705 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.05■□□□□ 0.16
Hcn3O88705 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.05■□□□□ 0.16
Hcn3O88705 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hcn3O88705 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcn3O88705 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Hcn3O88705 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Gm13401-201ENSMUST00000117074 291 ntBASIC16.04■□□□□ 0.16
Hcn3O88705 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.04■□□□□ 0.16
Hcn3O88705 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Hcn3O88705 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Hcn3O88705 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Hcn3O88705 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Hcn3O88705 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Hcn3O88705 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcn3O88705 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hcn3O88705 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.03■□□□□ 0.16
Hcn3O88705 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hcn3O88705 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hcn3O88705 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.03■□□□□ 0.16
Hcn3O88705 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.03■□□□□ 0.16
Hcn3O88705 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Gm2559-201ENSMUST00000201323 363 ntBASIC16.03■□□□□ 0.16
Hcn3O88705 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.03■□□□□ 0.16
Hcn3O88705 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.03■□□□□ 0.16
Hcn3O88705 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Hcn3O88705 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hcn3O88705 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Hcn3O88705 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hcn3O88705 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Hcn3O88705 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hcn3O88705 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hcn3O88705 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hcn3O88705 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.02■□□□□ 0.16
Hcn3O88705 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.02■□□□□ 0.16
Hcn3O88705 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hcn3O88705 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hcn3O88705 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Hcn3O88705 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Hcn3O88705 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hcn3O88705 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hcn3O88705 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hcn3O88705 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hcn3O88705 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Hcn3O88705 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.01■□□□□ 0.15
Hcn3O88705 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.01■□□□□ 0.15
Hcn3O88705 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.01■□□□□ 0.15
Hcn3O88705 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hcn3O88705 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Hcn3O88705 Gm12896-201ENSMUST00000118430 226 ntBASIC16.01■□□□□ 0.15
Hcn3O88705 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.01■□□□□ 0.15
Hcn3O88705 Gm20049-201ENSMUST00000219950 730 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms