Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3fO88632 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3fO88632 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sema3fO88632 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3fO88632 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sema3fO88632 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3fO88632 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3fO88632 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.25■□□□□ 0.67
Sema3fO88632 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.24■□□□□ 0.67
Sema3fO88632 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sema3fO88632 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.24■□□□□ 0.67
Sema3fO88632 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.24■□□□□ 0.67
Sema3fO88632 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sema3fO88632 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Sema3fO88632 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3fO88632 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sema3fO88632 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sema3fO88632 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Sema3fO88632 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.23■□□□□ 0.67
Sema3fO88632 Gm12895-201ENSMUST00000122214 226 ntBASIC19.23■□□□□ 0.67
Sema3fO88632 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.23■□□□□ 0.67
Sema3fO88632 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Sema3fO88632 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.23■□□□□ 0.67
Sema3fO88632 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3fO88632 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.22■□□□□ 0.67
Sema3fO88632 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sema3fO88632 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sema3fO88632 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.22■□□□□ 0.67
Sema3fO88632 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.22■□□□□ 0.67
Sema3fO88632 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.22■□□□□ 0.67
Sema3fO88632 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sema3fO88632 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Sema3fO88632 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sema3fO88632 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3fO88632 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.21■□□□□ 0.67
Sema3fO88632 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.21■□□□□ 0.67
Sema3fO88632 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.21■□□□□ 0.67
Sema3fO88632 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.21■□□□□ 0.67
Sema3fO88632 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.21■□□□□ 0.67
Sema3fO88632 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Birc2-201ENSMUST00000054878 378 ntBASIC19.21■□□□□ 0.67
Sema3fO88632 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sema3fO88632 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3fO88632 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Sema3fO88632 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.2■□□□□ 0.66
Sema3fO88632 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.2■□□□□ 0.66
Sema3fO88632 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.2■□□□□ 0.66
Sema3fO88632 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sema3fO88632 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sema3fO88632 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms