Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rdh5O55240 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rdh5O55240 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rdh5O55240 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.85■□□□□ 0.13
Rdh5O55240 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.84■□□□□ 0.13
Rdh5O55240 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rdh5O55240 Gm13216-201ENSMUST00000117145 591 ntBASIC15.84■□□□□ 0.13
Rdh5O55240 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.84■□□□□ 0.13
Rdh5O55240 Gm10231-201ENSMUST00000181584 441 ntBASIC15.84■□□□□ 0.13
Rdh5O55240 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Gm10175-202ENSMUST00000208752 441 ntBASIC15.84■□□□□ 0.13
Rdh5O55240 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rdh5O55240 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh5O55240 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.84■□□□□ 0.13
Rdh5O55240 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.83■□□□□ 0.13
Rdh5O55240 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.83■□□□□ 0.13
Rdh5O55240 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.83■□□□□ 0.12
Rdh5O55240 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.83■□□□□ 0.12
Rdh5O55240 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh5O55240 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.83■□□□□ 0.12
Rdh5O55240 Gm11539-201ENSMUST00000119837 557 ntBASIC15.83■□□□□ 0.12
Rdh5O55240 Gm13436-201ENSMUST00000120418 567 ntBASIC15.83■□□□□ 0.12
Rdh5O55240 Gm13559-201ENSMUST00000120476 863 ntBASIC15.83■□□□□ 0.12
Rdh5O55240 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh5O55240 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Rdh5O55240 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rdh5O55240 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh5O55240 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh5O55240 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh5O55240 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh5O55240 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh5O55240 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh5O55240 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rdh5O55240 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.83■□□□□ 0.12
Rdh5O55240 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh5O55240 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Rdh5O55240 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.82■□□□□ 0.12
Rdh5O55240 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rdh5O55240 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.82■□□□□ 0.12
Rdh5O55240 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.82■□□□□ 0.12
Rdh5O55240 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rdh5O55240 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rdh5O55240 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh5O55240 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rdh5O55240 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rdh5O55240 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.81■□□□□ 0.12
Rdh5O55240 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.81■□□□□ 0.12
Rdh5O55240 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms