Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.68■□□□□ 0.42
Pja1O55176 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Pja1O55176 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pja1O55176 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pja1O55176 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
Pja1O55176 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Gm7638-201ENSMUST00000121348 967 ntBASIC17.67■□□□□ 0.42
Pja1O55176 Gm15378-201ENSMUST00000121894 207 ntBASIC17.67■□□□□ 0.42
Pja1O55176 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.67■□□□□ 0.42
Pja1O55176 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pja1O55176 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pja1O55176 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pja1O55176 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pja1O55176 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pja1O55176 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pja1O55176 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pja1O55176 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.66■□□□□ 0.42
Pja1O55176 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.66■□□□□ 0.42
Pja1O55176 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pja1O55176 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pja1O55176 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.66■□□□□ 0.42
Pja1O55176 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pja1O55176 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.65■□□□□ 0.42
Pja1O55176 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pja1O55176 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.65■□□□□ 0.42
Pja1O55176 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pja1O55176 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pja1O55176 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.65■□□□□ 0.42
Pja1O55176 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.65■□□□□ 0.42
Pja1O55176 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pja1O55176 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.65■□□□□ 0.42
Pja1O55176 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pja1O55176 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pja1O55176 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pja1O55176 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pja1O55176 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pja1O55176 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pja1O55176 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pja1O55176 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pja1O55176 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pja1O55176 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pja1O55176 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.64■□□□□ 0.41
Pja1O55176 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Pja1O55176 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Gm38027-201ENSMUST00000192315 235 ntBASIC17.64■□□□□ 0.41
Pja1O55176 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.64■□□□□ 0.41
Pja1O55176 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.64■□□□□ 0.41
Pja1O55176 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pja1O55176 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Pja1O55176 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pja1O55176 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pja1O55176 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms