Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
ChkaO54804 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ChkaO54804 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ChkaO54804 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ChkaO54804 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.89■□□□□ 0.29
ChkaO54804 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ChkaO54804 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.89■□□□□ 0.29
ChkaO54804 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
ChkaO54804 Gm18958-201ENSMUST00000174258 762 ntBASIC16.89■□□□□ 0.29
ChkaO54804 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Timm23-208ENSMUST00000226683 750 ntBASIC16.89■□□□□ 0.29
ChkaO54804 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.89■□□□□ 0.29
ChkaO54804 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ChkaO54804 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ChkaO54804 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ChkaO54804 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.88■□□□□ 0.29
ChkaO54804 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
ChkaO54804 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.88■□□□□ 0.29
ChkaO54804 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.88■□□□□ 0.29
ChkaO54804 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ChkaO54804 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ChkaO54804 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
ChkaO54804 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Gm715-201ENSMUST00000117865 831 ntBASIC16.87■□□□□ 0.29
ChkaO54804 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.87■□□□□ 0.29
ChkaO54804 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.87■□□□□ 0.29
ChkaO54804 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.87■□□□□ 0.29
ChkaO54804 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.87■□□□□ 0.29
ChkaO54804 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.87■□□□□ 0.29
ChkaO54804 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.87■□□□□ 0.29
ChkaO54804 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.87■□□□□ 0.29
ChkaO54804 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ChkaO54804 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ChkaO54804 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.86■□□□□ 0.29
ChkaO54804 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.86■□□□□ 0.29
ChkaO54804 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.86■□□□□ 0.29
ChkaO54804 Gm3375-201ENSMUST00000203929 796 ntBASIC16.86■□□□□ 0.29
ChkaO54804 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.86■□□□□ 0.29
ChkaO54804 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ChkaO54804 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ChkaO54804 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ChkaO54804 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ChkaO54804 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms