Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.12■□□□□ 0.49
Per1O35973 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Per1O35973 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Per1O35973 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.11■□□□□ 0.49
Per1O35973 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Per1O35973 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Per1O35973 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.11■□□□□ 0.49
Per1O35973 Gm17807-201ENSMUST00000186869 298 ntBASIC18.11■□□□□ 0.49
Per1O35973 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Per1O35973 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Per1O35973 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Per1O35973 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Per1O35973 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Per1O35973 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Per1O35973 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Per1O35973 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.1■□□□□ 0.49
Per1O35973 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Per1O35973 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Gm9103-201ENSMUST00000119371 405 ntBASIC18.1■□□□□ 0.49
Per1O35973 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.1■□□□□ 0.49
Per1O35973 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.1■□□□□ 0.49
Per1O35973 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Per1O35973 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Per1O35973 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.1■□□□□ 0.49
Per1O35973 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Per1O35973 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Per1O35973 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.09■□□□□ 0.49
Per1O35973 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 Gm10052-201ENSMUST00000168019 960 ntBASIC18.09■□□□□ 0.49
Per1O35973 Mir3081-201ENSMUST00000175305 84 ntBASIC18.09■□□□□ 0.49
Per1O35973 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Per1O35973 Gm36967-201ENSMUST00000193814 266 ntBASIC18.09■□□□□ 0.49
Per1O35973 Gm7729-201ENSMUST00000050143 801 ntBASIC18.09■□□□□ 0.49
Per1O35973 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.09■□□□□ 0.49
Per1O35973 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Per1O35973 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Per1O35973 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Per1O35973 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Per1O35973 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Per1O35973 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Per1O35973 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Per1O35973 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.08■□□□□ 0.48
Per1O35973 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.08■□□□□ 0.48
Per1O35973 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.08■□□□□ 0.48
Per1O35973 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Per1O35973 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Per1O35973 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Per1O35973 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Per1O35973 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Per1O35973 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Per1O35973 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Per1O35973 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Per1O35973 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Per1O35973 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Per1O35973 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Per1O35973 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.07■□□□□ 0.48
Per1O35973 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.07■□□□□ 0.48
Per1O35973 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Per1O35973 Gm18669-201ENSMUST00000216049 778 ntBASIC18.07■□□□□ 0.48
Per1O35973 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Per1O35973 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Per1O35973 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Per1O35973 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.07■□□□□ 0.48
Per1O35973 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Per1O35973 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Per1O35973 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Per1O35973 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Per1O35973 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms