Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Matn3O35701 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Matn3O35701 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Matn3O35701 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Matn3O35701 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Matn3O35701 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Matn3O35701 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Gm27011-201ENSMUST00000182352 972 ntBASIC15.24■□□□□ 0.03
Matn3O35701 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Matn3O35701 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Matn3O35701 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Matn3O35701 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Matn3O35701 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Matn3O35701 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.23■□□□□ 0.03
Matn3O35701 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.23■□□□□ 0.03
Matn3O35701 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Matn3O35701 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Matn3O35701 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Matn3O35701 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Matn3O35701 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Matn3O35701 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Matn3O35701 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Matn3O35701 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Matn3O35701 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Matn3O35701 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.22■□□□□ 0.03
Matn3O35701 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Matn3O35701 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.22■□□□□ 0.03
Matn3O35701 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.22■□□□□ 0.03
Matn3O35701 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Matn3O35701 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Matn3O35701 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
Matn3O35701 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Matn3O35701 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Matn3O35701 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Matn3O35701 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Matn3O35701 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Matn3O35701 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Matn3O35701 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms