Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Npc1O35604 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Npc1O35604 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Npc1O35604 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Npc1O35604 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Npc1O35604 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.31■□□□□ 0.2
Npc1O35604 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Npc1O35604 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.31■□□□□ 0.2
Npc1O35604 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Npc1O35604 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.31■□□□□ 0.2
Npc1O35604 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Npc1O35604 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Npc1O35604 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Npc1O35604 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Npc1O35604 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Npc1O35604 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Npc1O35604 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.3■□□□□ 0.2
Npc1O35604 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Npc1O35604 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Npc1O35604 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.3■□□□□ 0.2
Npc1O35604 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.3■□□□□ 0.2
Npc1O35604 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Npc1O35604 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.3■□□□□ 0.2
Npc1O35604 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Npc1O35604 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Npc1O35604 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Npc1O35604 Actl10-202ENSMUST00000226583 1501 ntBASIC16.29■□□□□ 0.2
Npc1O35604 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Npc1O35604 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Npc1O35604 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Npc1O35604 Gm11355-201ENSMUST00000121120 306 ntBASIC16.29■□□□□ 0.2
Npc1O35604 Gm26039-201ENSMUST00000158152 144 ntBASIC16.29■□□□□ 0.2
Npc1O35604 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.29■□□□□ 0.2
Npc1O35604 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Npc1O35604 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.28■□□□□ 0.2
Npc1O35604 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Npc1O35604 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Npc1O35604 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Npc1O35604 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Npc1O35604 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Npc1O35604 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Npc1O35604 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms