Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.67■□□□□ 0.1
Abca4O35600 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.67■□□□□ 0.1
Abca4O35600 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.67■□□□□ 0.1
Abca4O35600 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.67■□□□□ 0.1
Abca4O35600 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Abca4O35600 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.67■□□□□ 0.1
Abca4O35600 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Abca4O35600 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.67■□□□□ 0.1
Abca4O35600 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Mir1895-201ENSMUST00000122615 79 ntBASIC15.66■□□□□ 0.1
Abca4O35600 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Abca4O35600 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.66■□□□□ 0.1
Abca4O35600 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.66■□□□□ 0.1
Abca4O35600 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Abca4O35600 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.66■□□□□ 0.1
Abca4O35600 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Abca4O35600 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Abca4O35600 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.66■□□□□ 0.1
Abca4O35600 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.66■□□□□ 0.1
Abca4O35600 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Abca4O35600 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.66■□□□□ 0.1
Abca4O35600 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.66■□□□□ 0.1
Abca4O35600 Gm44492-201ENSMUST00000197012 141 ntBASIC15.66■□□□□ 0.1
Abca4O35600 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca4O35600 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.65■□□□□ 0.1
Abca4O35600 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.65■□□□□ 0.1
Abca4O35600 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Abca4O35600 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Abca4O35600 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Abca4O35600 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Abca4O35600 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.65■□□□□ 0.1
Abca4O35600 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.65■□□□□ 0.1
Abca4O35600 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.65■□□□□ 0.1
Abca4O35600 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca4O35600 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Abca4O35600 Notumos-201ENSMUST00000151998 2659 ntBASIC15.64■□□□□ 0.09
Abca4O35600 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca4O35600 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca4O35600 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Abca4O35600 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca4O35600 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Abca4O35600 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca4O35600 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Abca4O35600 Gm17271-201ENSMUST00000165535 355 ntBASIC15.64■□□□□ 0.09
Abca4O35600 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Abca4O35600 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.64■□□□□ 0.09
Abca4O35600 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca4O35600 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Abca4O35600 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abca4O35600 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca4O35600 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Abca4O35600 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca4O35600 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Abca4O35600 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abca4O35600 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca4O35600 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Abca4O35600 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abca4O35600 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.63■□□□□ 0.09
Abca4O35600 Mir449b-201ENSMUST00000104833 80 ntBASIC15.63■□□□□ 0.09
Abca4O35600 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Abca4O35600 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abca4O35600 Gm27437-201ENSMUST00000183429 107 ntBASIC15.63■□□□□ 0.09
Abca4O35600 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Abca4O35600 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca4O35600 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms