Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.93□□□□□ -0.02
Alx4O35137 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.93□□□□□ -0.02
Alx4O35137 Gm27000-201ENSMUST00000182943 842 ntBASIC14.93□□□□□ -0.02
Alx4O35137 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Alx4O35137 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Alx4O35137 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.93□□□□□ -0.02
Alx4O35137 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx4O35137 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Alx4O35137 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.92□□□□□ -0.02
Alx4O35137 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Alx4O35137 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.92□□□□□ -0.02
Alx4O35137 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.92□□□□□ -0.02
Alx4O35137 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.92□□□□□ -0.02
Alx4O35137 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.92□□□□□ -0.02
Alx4O35137 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Alx4O35137 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Alx4O35137 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Alx4O35137 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Alx4O35137 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx4O35137 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Alx4O35137 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Alx4O35137 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.91□□□□□ -0.02
Alx4O35137 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.91□□□□□ -0.02
Alx4O35137 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.91□□□□□ -0.02
Alx4O35137 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Alx4O35137 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx4O35137 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.9□□□□□ -0.02
Alx4O35137 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Alx4O35137 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Alx4O35137 Gm37179-201ENSMUST00000194862 823 ntBASIC14.9□□□□□ -0.02
Alx4O35137 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx4O35137 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Alx4O35137 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Alx4O35137 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx4O35137 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms