Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.12■□□□□ 0.33
Ercc2O08811 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Ercc2O08811 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.12■□□□□ 0.33
Ercc2O08811 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.12■□□□□ 0.33
Ercc2O08811 Mir7071-201ENSMUST00000184847 69 ntBASIC17.12■□□□□ 0.33
Ercc2O08811 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ercc2O08811 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ercc2O08811 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.12■□□□□ 0.33
Ercc2O08811 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc2O08811 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.11■□□□□ 0.33
Ercc2O08811 Gm13216-201ENSMUST00000117145 591 ntBASIC17.11■□□□□ 0.33
Ercc2O08811 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ercc2O08811 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc2O08811 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Ercc2O08811 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.1■□□□□ 0.33
Ercc2O08811 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.1■□□□□ 0.33
Ercc2O08811 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.1■□□□□ 0.33
Ercc2O08811 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.1■□□□□ 0.33
Ercc2O08811 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ercc2O08811 Gm10231-201ENSMUST00000181584 441 ntBASIC17.1■□□□□ 0.33
Ercc2O08811 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Gm10175-202ENSMUST00000208752 441 ntBASIC17.1■□□□□ 0.33
Ercc2O08811 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ercc2O08811 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.1■□□□□ 0.33
Ercc2O08811 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.1■□□□□ 0.33
Ercc2O08811 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ercc2O08811 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ercc2O08811 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ercc2O08811 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.1■□□□□ 0.33
Ercc2O08811 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc2O08811 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ercc2O08811 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Gm26039-201ENSMUST00000158152 144 ntBASIC17.09■□□□□ 0.33
Ercc2O08811 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.09■□□□□ 0.33
Ercc2O08811 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.09■□□□□ 0.33
Ercc2O08811 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.09■□□□□ 0.33
Ercc2O08811 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Ercc2O08811 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ercc2O08811 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Ercc2O08811 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc2O08811 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc2O08811 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc2O08811 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc2O08811 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc2O08811 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc2O08811 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Ercc2O08811 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ercc2O08811 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ercc2O08811 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc2O08811 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc2O08811 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc2O08811 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc2O08811 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc2O08811 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc2O08811 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc2O08811 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms