Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tcof1O08784 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Tcof1O08784 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tcof1O08784 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tcof1O08784 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tcof1O08784 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Tcof1O08784 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tcof1O08784 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tcof1O08784 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tcof1O08784 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tcof1O08784 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Tcof1O08784 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tcof1O08784 Gm11950-201ENSMUST00000121615 838 ntBASIC19.55■□□□□ 0.72
Tcof1O08784 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.55■□□□□ 0.72
Tcof1O08784 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Tcof1O08784 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tcof1O08784 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Tcof1O08784 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tcof1O08784 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tcof1O08784 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tcof1O08784 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.55■□□□□ 0.72
Tcof1O08784 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tcof1O08784 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Tcof1O08784 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tcof1O08784 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tcof1O08784 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcof1O08784 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tcof1O08784 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcof1O08784 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Tcof1O08784 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.54■□□□□ 0.72
Tcof1O08784 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Tcof1O08784 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcof1O08784 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcof1O08784 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.54■□□□□ 0.72
Tcof1O08784 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcof1O08784 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tcof1O08784 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tcof1O08784 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcof1O08784 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcof1O08784 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Tcof1O08784 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.53■□□□□ 0.72
Tcof1O08784 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Tcof1O08784 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.53■□□□□ 0.72
Tcof1O08784 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.53■□□□□ 0.72
Tcof1O08784 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.53■□□□□ 0.72
Tcof1O08784 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcof1O08784 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tcof1O08784 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.52■□□□□ 0.72
Tcof1O08784 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 Gm6623-201ENSMUST00000173570 544 ntBASIC19.52■□□□□ 0.72
Tcof1O08784 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Tcof1O08784 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.52■□□□□ 0.72
Tcof1O08784 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.52■□□□□ 0.72
Tcof1O08784 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.52■□□□□ 0.72
Tcof1O08784 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tcof1O08784 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tcof1O08784 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.52■□□□□ 0.71
Tcof1O08784 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.51■□□□□ 0.71
Tcof1O08784 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.51■□□□□ 0.71
Tcof1O08784 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.51■□□□□ 0.71
Tcof1O08784 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Tcof1O08784 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.51■□□□□ 0.71
Tcof1O08784 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcof1O08784 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tcof1O08784 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tcof1O08784 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tcof1O08784 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tcof1O08784 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tcof1O08784 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms