Protein–RNA interactions for Protein: O08750

Nfil3, Nuclear factor interleukin-3-regulated protein, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfil3O08750 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Nfil3O08750 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.21■□□□□ 0.67
Nfil3O08750 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nfil3O08750 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.21■□□□□ 0.67
Nfil3O08750 Gm18115-201ENSMUST00000221209 621 ntBASIC19.21■□□□□ 0.67
Nfil3O08750 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nfil3O08750 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfil3O08750 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Mir770-201ENSMUST00000103252 94 ntBASIC19.2■□□□□ 0.66
Nfil3O08750 Gm29518-201ENSMUST00000190858 372 ntBASIC19.2■□□□□ 0.66
Nfil3O08750 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nfil3O08750 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.2■□□□□ 0.66
Nfil3O08750 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.2■□□□□ 0.66
Nfil3O08750 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nfil3O08750 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfil3O08750 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfil3O08750 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfil3O08750 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.19■□□□□ 0.66
Nfil3O08750 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nfil3O08750 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfil3O08750 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nfil3O08750 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.19■□□□□ 0.66
Nfil3O08750 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfil3O08750 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfil3O08750 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Gm6623-201ENSMUST00000173570 544 ntBASIC19.18■□□□□ 0.66
Nfil3O08750 Gm33142-201ENSMUST00000193913 867 ntBASIC19.18■□□□□ 0.66
Nfil3O08750 Gm44450-201ENSMUST00000199528 114 ntBASIC19.18■□□□□ 0.66
Nfil3O08750 Gm17808-201ENSMUST00000200859 894 ntBASIC19.18■□□□□ 0.66
Nfil3O08750 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.18■□□□□ 0.66
Nfil3O08750 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nfil3O08750 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nfil3O08750 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nfil3O08750 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfil3O08750 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nfil3O08750 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.17■□□□□ 0.66
Nfil3O08750 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.17■□□□□ 0.66
Nfil3O08750 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.17■□□□□ 0.66
Nfil3O08750 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nfil3O08750 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nfil3O08750 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Nfil3O08750 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.16■□□□□ 0.66
Nfil3O08750 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.16■□□□□ 0.66
Nfil3O08750 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfil3O08750 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Nfil3O08750 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfil3O08750 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nfil3O08750 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfil3O08750 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nfil3O08750 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.16■□□□□ 0.66
Nfil3O08750 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Nfil3O08750 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.16■□□□□ 0.66
Nfil3O08750 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfil3O08750 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfil3O08750 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfil3O08750 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms