Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Polr2jO08740 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Polr2jO08740 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Polr2jO08740 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Polr2jO08740 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Polr2jO08740 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Polr2jO08740 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Polr2jO08740 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
Polr2jO08740 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.07■□□□□ 0.16
Polr2jO08740 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.07■□□□□ 0.16
Polr2jO08740 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.07■□□□□ 0.16
Polr2jO08740 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Polr2jO08740 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Polr2jO08740 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Polr2jO08740 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.07■□□□□ 0.16
Polr2jO08740 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Polr2jO08740 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.07■□□□□ 0.16
Polr2jO08740 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.06■□□□□ 0.16
Polr2jO08740 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Polr2jO08740 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Gm20049-201ENSMUST00000219950 730 ntBASIC16.06■□□□□ 0.16
Polr2jO08740 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.06■□□□□ 0.16
Polr2jO08740 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Polr2jO08740 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Polr2jO08740 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Polr2jO08740 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Polr2jO08740 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Polr2jO08740 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.05■□□□□ 0.16
Polr2jO08740 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.05■□□□□ 0.16
Polr2jO08740 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Polr2jO08740 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.05■□□□□ 0.16
Polr2jO08740 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Polr2jO08740 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.05■□□□□ 0.16
Polr2jO08740 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Polr2jO08740 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.04■□□□□ 0.16
Polr2jO08740 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.04■□□□□ 0.16
Polr2jO08740 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.04■□□□□ 0.16
Polr2jO08740 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Polr2jO08740 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.04■□□□□ 0.16
Polr2jO08740 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.04■□□□□ 0.16
Polr2jO08740 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.04■□□□□ 0.16
Polr2jO08740 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Polr2jO08740 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Polr2jO08740 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Polr2jO08740 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms