Protein–RNA interactions for Protein: J3QPP8

Alkal1, ALK and LTK ligand 1, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkal1J3QPP8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Actl10-202ENSMUST00000226583 1501 ntBASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Gm11539-201ENSMUST00000119837 557 ntBASIC16.11■□□□□ 0.17
Alkal1J3QPP8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Gm7370-201ENSMUST00000219471 767 ntBASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alkal1J3QPP8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.1■□□□□ 0.17
Alkal1J3QPP8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Alkal1J3QPP8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Gm18115-201ENSMUST00000221209 621 ntBASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Phf7-203ENSMUST00000226565 1971 ntBASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alkal1J3QPP8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Alkal1J3QPP8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Alkal1J3QPP8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Alkal1J3QPP8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.08■□□□□ 0.17
Alkal1J3QPP8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alkal1J3QPP8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.07■□□□□ 0.16
Alkal1J3QPP8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Gm5417-201ENSMUST00000079706 384 ntBASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alkal1J3QPP8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms