Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc1G3X9F6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc1G3X9F6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Gm1401-201ENSMUST00000122048 772 ntBASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Gm37935-201ENSMUST00000192012 982 ntBASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc1G3X9F6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc1G3X9F6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Sh3tc1G3X9F6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms