Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdh9F8VPK8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdh9F8VPK8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh9F8VPK8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh9F8VPK8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh9F8VPK8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh9F8VPK8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms